MONDAY, 15
​9:00 - 9:30
Welcome opening by the Organizers
TUESDAY, 16
Morning Session. Chair: Mario Nicodemi
​9:30 - 10:15
Kerstin Bystricky (University of Toulouse, France)
Chromatin folding in oestrogen regulated transcription
10:15 - 10:45
Coffee break
​11:30 - 12:15
Marc Marti-Renom (CNAG-Center for Genomic Regulation, Barcelona, Spain)
Does color have a structure? Modeling 3D domains of the fly genome
​16:30 - 17:15
Diego Villar Lozano (Wellcome Trust Sanger Institute, Hinxton, UK)
ChIP-Seq analysis of regulatory evolution in 20 mammals
9:15 - 10:00
Christophe Zimmer (Institut Pasteur, Paris, France)
Imaging and modeling the dynamic genome architecture of yeast
​10:00-10:30
Coffee break
WEDNESDAY, 17
Morning Session. Chair: Peter Fraser
SCHEDULE.
10:45 - 11:30
Job Dekker (University of Massachussetts, USA)
Two ways to fold the genome
​13:15 - 14:30
Lunch
​15:15 - 16:00
José M. Vilar (University of the Basque Country, Bilbao, Spain)
Gene expression and long-range cooperativity on DNA
​17:15 - 18:00
Sarah Teichmann (EMBL-European Bioinformatics Institute & Wellcome Trust Sanger Institute, Hinxton, UK)
Understanding cellular heterogeneity
​11:15 - 12:00
Ana Pombo (Max-Delbrück-Zentrum, Berlin, Germany)
Modelling large-scale organization of chromatin: A tale of the HoxB locus organization in mouse ES cells
​12:15 - 12:45
Jörg Langowski (German Cancer Research Center, Heidelberg, Germany)
Protein interaction and transport maps of live cell nuclei using a single plane illumination microscope with fluorescence correlation spectroscopy
16:00 - 16:30
Coffee break
​12:30 - 14:30
Lunch
​16:00 - 16:30
Coffee break
11:15 - 11:45
Yuval Garini (Bar Ilan University, Ramat Gan, Israel)
Nuclear genome organization explored by dynamic studies in live cells
​11:45 - 12:30
Davide Marenduzzo (University of Edinburgh, UK)
Modelling three-dimensional genome structure in eukaryotes: Bridging-induced chromosome organisation and topological domains
​14:30 - 15:15
Ivan Junier (Center for Genomic Regulation, Barcelona, Spain)
DNA segregation in E. coli: When chromosome structuring really matters
​11:15 - 12:00
Helmut Schiessel (University of Leiden, The Netherlands)
The mechanical genome
​10:30 - 11:15
Cristian Micheletti (Sissa, Trieste, Italy)
Colocalization of coregulated genes: A steered Molecular Dynamics study of human chromosome 19
​15:15 - 15:45
Coffee break
9:15 - 10:00
Ralf Everaers (Ecole Normale Supérieure de Lyon, France)
The Physics of chromosome crumpling
​12:45 - 14:30
Lunch
​16:30 - 17:15
Pascal Carrivain (Institute for Human Genetics, Montpellier, France)
Predicting 3D folding of the fly genome
10:30 - 11:15
Olivier Martin (University Paris-Sud, France)
The bewildering ballet of chromosomes in meiosis
​10:00-10:30
Coffee break
​15:15 - 16:00
Dieter W. Heermann (University of Heidelberg, Germany)
The interaction of chromatin with multi-Cys2His2 zinc finger proteins
​11:15 - 12:00
Emmanuelle Fabre (Institut Pasteur, Paris, France)
Chromosome organization in yeast: A dynamic point of view
10:30 - 11:15
Justin O'Sullivan (University of Auckland, New Zealand)
Modelling the link between genome structure and function in single cell prokaryotes and eukaryotes
​12:45 - 14:30
Lunch
12:00 - 12:45
Guido Tiana (University of Milan, Italy)
Describing conformational fluctuations in chromatin: The case of the X inactivation centre
​10:00-10:30
Coffee break
​09:15 - 10:00
Julien Mozziconacci (University "Pierre et Marie Curie", Paris, France)
Towards a 3D genome browser
THURSDAY, 18
Morning Session. Chair: Ana Pombo
​12:00 - 12:45
Andrew Seeber ("Friedrich Miescher" Institute, Basel, Switzerland)
Chromatin remodelers and the dynamic chromatin response to DNA damage
​10:30 - 11:15
Andrea De Martino (University of Rome, Italy)
microRNA-based regulation: From the ceRNA hypothesis to system-level effects in post-transcriptional control
​10:00 - 10:30
Coffee break
9:15 - 10:00
Pietro Cicuta (University of Cambridge, UK)
Insights on the bacterial nucleoid structure from fast chromosome dynamics
​14:30 - 15:15
Kim Sneppen ("Niels Bohr" Institute, Copenhagen, Denmark)
Nucleosome mediated epigenetics
15:15 - 16:00
Martin Howard ("John Innes" Centre, Norwich, UK)
Dissecting quantitative epigenetic dynamics through mathematical modelling and experiments
​16:30 - 18:00
Short oral presentations (from the best Posters)
TBA
FRIDAY, 19
Morning Session. Chair: Angelo Rosa
​15:45 - 17:45
Poster Session.
The best 4-5 posters will be selected for short (15 mins) oral presentations (to be given on Thursday).
​16:00-16:30
Coffee break
​12:00 - 12:15
Concluding remarks
​12:30
Lunch
​14:30 - 15:15
Michele Caselle (University of Turin, Italy)
A Statistical Mechanics point of view on the long range correlations in DNA sequences
​14:30 - 15:15
Peter Fraser (The Babraham Institute, Cambridge, UK)
Single-cell Hi-C and functional organization of the nucleus
​17:15 - 18:00
Marco Cosentino-Lagomarsino (University "Pierre et Marie Curie", Paris, France)
Combined effects of self-adhesion and bridging in a prototypical nucleoid-inspired model
Morning Session. Chair: François Képès
Afternoon Session. Chair: Mario Nicodemi
Afternoon Session. Chair: Angelo Rosa
Afternoon Session. Chair: Mario Nicodemi
Afternoon Session. Chair: Matteo Marsili
​12:45 - 13:15
Frank Alber (University of Southern California, Los Angeles, USA)
Exploring the dynamic landscape of 3D genome structures by population-based modeling